Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bra000147.1

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Description

AT2G39760 (E=3e-185) ATBPM3, BPM3 | BPM3; protein binding

Location

Chromosome A03: 9,551,542-9,554,300 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene Bra000147 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	Bra000147.1	1149	382aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M4C7G9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	2	141	-	SSF49599	-
CDD	161	281	-	cd18280	-
Gene3D	283	363	-	1.25.40.420	-
CDD	281	344	BPM, C-terminal	cd14736	IPR034090 [Display all genes with this domain]
PANTHER	2	346	BTB/POZ and MATH domain-containing protein 1-6	PTHR26379	IPR045005 [Display all genes with this domain]
Pfam	166	283	BTB/POZ domain	PF00651	IPR000210 [Display all genes with this domain]
PROSITE profiles	175	236	BTB/POZ domain	PS50097	IPR000210 [Display all genes with this domain]
SMART	175	284	BTB/POZ domain	SM00225	IPR000210 [Display all genes with this domain]
PROSITE profiles	5	139	MATH/TRAF domain	PS50144	IPR002083 [Display all genes with this domain]
CDD	6	139	MATH/TRAF domain	cd00121	IPR002083 [Display all genes with this domain]
Pfam	7	139	MATH/TRAF domain	PF22486	IPR002083 [Display all genes with this domain]
SMART	10	122	MATH/TRAF domain	SM00061	IPR002083 [Display all genes with this domain]
Gene3D	152	278	SKP1/BTB/POZ domain superfamily	3.30.710.10	IPR011333 [Display all genes with this domain]
Superfamily	157	282	SKP1/BTB/POZ domain superfamily	SSF54695	IPR011333 [Display all genes with this domain]
Gene3D	4	143	TRAF-like	2.60.210.10	IPR008974 [Display all genes with this domain]

Other features

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Feature type	Start	End
Alphafold	1	382

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