Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bo8g108650.1

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Description

endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT1G11800](projected from arabidopsis_thaliana,AT1G11800)

Location

Chromosome C8: 38,776,250-38,777,761 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene Bo8g108650 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Bo8g108650.1	1293	430aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3DXW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........tatccgtaactgtcgtcaaagtcaaaatagataaataaaaattaggtcaa
1	Bo8g108650.1_exon_1	38,776,250	38,776,697	0	1	448	ATGTCAGCAACCAGATTCTTCCGACTCTTGACTACTCTCGCGATGTCGTCATCGTCATCC TCATCCTCTTGGTCCTGCACCAAATGTACATTCCTCAATTCTCCTTCTCAGAAGCTCAAT TGCATGATCTGCTTGACTCCCCTCTCCACCCCTTCTCCCCTCTCAGCTTCCTCCAGCGAC GAACCTAAATGGGCGTGTAAAGGCTGCACCTTTCTGAACACGTACAAGAACTCATCCTGC GAAATCTGCGGGACGCGATCGCCGTCGTCTTCTTCTCTCCTGGGCTTCGACGATTTGACC GATTCGGGTCTCGAAAGCAACAACAACTCCGTCGGGTCCGTTTTCTTTCCTCTGCGGCGG TGTAGCAAGCGCAAGGCCATGGAAGATGATGACGTCATCGAGGTTGATGGTGGCTCTGTG AAGAAAAGAAACGAAATTGAATCGAAAG
	Intron 1-2	38,776,698	38,776,764			67	gttggatctttaaaactccttgctc..........tttgtttgattactcttatctgtag
2	Bo8g108650.1_exon_2	38,776,765	38,776,913	1	0	149	GGGAAGCTTCTGGTTCAGGAACAGCTTTGTCTTGTGTGAAGATTTTGACTTACAATGTTT GGTTCCGTGAAGATCTTGAGTTGAGTAATAGGATGAGAGCGATTGGTCACCTTATCCAGC TCCATTCTCCTCATCTCATATGCTTTCAG
	Intron 2-3	38,776,914	38,776,990			77	gtcattttttaacatttaagttagt..........gacggtttttgtgtggtctttgcag
3	Bo8g108650.1_exon_3	38,776,991	38,777,101	0	0	111	GAAGTTATCCCTGAGATATATGAGATTTTCCGCAAATCCAACTGGTGGAAAGAGTATACT TGTTCTGTCTTAGTCGATGCGTCACAATCAAGAGGCTACTATTGCATGCTG
	Intron 3-4	38,777,102	38,777,176			75	gtaggctcttagcttgtagatttgt..........actgactcttatggttgatttgcag
4	Bo8g108650.1_exon_4	38,777,177	38,777,761	0	0	585	TTGAGCAAGGTGGGGATGAAGTCTTCAAGCTGTAAAAGCTTTAGGAACTCGATCATGGGT AGAGACTTATCCGTTGCAGAGGTTGAAGTTCCGGGGAGAAAGCCGCTTGTTCTGGCAACG AGCCATCTCGAGAGCCCCTGTCCAGGTCCTCCTAAATGGGACCAGATGTTTAGCCGAGAA CGCGTCGAACAAGCCAATGAGGCCATGGAGTCTCTCAGAGCTAACCCCAACGTGGTATTT GGGGGAGATATGAACTGGGACGACAAGCTAGATGGGAAGTTTCCTTTGCCGGACCAATGG GTTGATGTTTGGGAGGTTTTGAAGCCAGGTGATCCCGGTTTTACGTACGACACTAAAGCG AACCCGATGCTGTCTGGTAACCGAGCTTTGCAGAAGCGGCTAGACCGTTTTTTCTGTCGG CTGGATGATTACAAGCTTGGTGGGATCGAGATGGTTGGGAAAGAGGCGCTTCCTGGTTTG TCCTATGTGAAAGAGAAGAGAGTGAGGGGTGACGTCAAGAAGCTGGAGCTTCCAGTGTTG CCTAGCGATCATTTTGGTCTGCTTTTAACTCTTTTGCCGAAATGA
	3' downstream sequence						gttcaaactatcggagctcgaaattccttttttcccctcgtggaacttct..........

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