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    Transcript: Bo6g001010.1

    Description

    ubiquitin interaction motif-containing protein [Source:TAIR;Acc:AT1G43690](projected from arabidopsis_thaliana,AT1G43690)

    Location

    Chromosome C6: 19,498-22,204 forward strand.

    About this transcript

    This transcript has 7 exons and is annotated with 11 domains and features.

    Gene

    This transcript is a product of gene Bo6g001010 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -Bo6g001010.11752583aa
     
    Protein coding
    		A0A0D3CNI0 Ensembl Canonical

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
    Markup
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........gtcatcctttttatcagatccgcaatcttaagatccgggaggtattctca
    1Bo6g001010.1_exon_119,49819,85902362 
    ATGGCGAATCATCAAGACGACGAGGATTTGGAATTGGCTCTTAAGATGAGTATGCAGTAC
AATCCCCCAGAGGCCAAACGGAGCAAACCCATTGAAGAAACTGGATCCGGATCTGGTGAA
TCGCCGGAGGCCAAAACACGGCGGTTGCAGAGGGAGATCATGGCTGCTGCGGCTGAGAAA
CGAATGCTGTCGTTTCCTAAGAGCCCCAGAGCTCTGGCTTCGGTTGCTGATAGCTGTAAA
GGGATTGGATCCGGTGGTGGTTTGGAGTTATCGCCTCAAGAGTCTAATCAGCTGTTCACA
ATGGTGTTTGGGAATGAGGTTTCCAAAAGCATACTTGCACAGTGGACTAATCAAGGCATA
AG
     Intron 1-219,86020,069210 
    gtaccatggatttattcaaaattta..........tttttttttgacaattctgctatag
    2Bo6g001010.1_exon_220,07020,1482079 
    GTTTAGCCCTCATCCTGAAACTACTATAGGGTTAGTGCAGCATGAAGGTGGCCCCTGCGG
TGTTTTAGCAGCATTACAG
     Intron 2-320,14920,263115 
    gtaacattctctctctctctctctt..........actgctcctttttttttctttgtag
    3Bo6g001010.1_exon_320,26420,40002137 
    GCATTTGTTCTTAAATACCTTCTTTACTTTCCGGATGACATAGGAAAAGATTCGCCGAGT
TTGGGTGTCAAAACATCTAAAAACCCTTATGTCGCATCAGACTCTTTCTCTTCTATACCA
GAAGAAGCAAAAACAAG
     Intron 3-420,40120,49191 
    gtgatttctttttctcatgagtgtt..........ctgtcattgtattttttttttgcag
    4Bo6g001010.1_exon_420,49220,60320112 
    GGCCCTTGTTAGAAGCATGTGTGAGATTCTATTTATGTGTGGGAACAATAACCGTGCTGT
AGTAGCGAGTTTCCTTTACTCTGAGGATCTCAATACTAATCAGAAAGATGAG
     Intron 4-520,60420,67370 
    gtaagtttcttttccatatttggtg..........actggttggttatttgctgttgcag
    5Bo6g001010.1_exon_520,67420,85000177 
    GTAATGGCTGCTGGGCTCCCCATTGAGTCTGCTTCAGATTTGCAAAAGATCTTAAGATTT
GAGACATTCACAACTCAGTCCAGTGCCCTTAGTAAGATAGCAGGCGCAATAACTGCTTTC
CAGAGTCGCGTGGGTGCTTTGCTATTCCTTATTTCAGCTTTACTCTCCCGTGGACTG
     Intron 5-620,85121,229379 
    gtattgacgcaacctttatccttat..........attaaaattatttttccataaacag
    6Bo6g001010.1_exon_621,23021,3010072 
    GATACTGTTCAAAACGACAGGGATGATCCAAACCTCCCCCTGGTAACTGCACCATTTGGA
CATGCCTCCCAG
     Intron 6-721,30221,39190 
    gtaatagaacgaacacatttccaga..........ttttctctgtaccctttttgattag
    7Bo6g001010.1_exon_721,39222,20400813 
    GAAATCGTAAACCTGCTATTGTGTGGTGAAGCGGTTCCTAATGTGTTTGATGGAAGGATG
GATTTTGGAGGCGGCATGTTTCTGAAAGGCATATCGAAGAATGTTGAGGTGGGCTTCCTG
ACGTTGCTCGAGTCTCTCAATTTCTGCAAAGTCGGTCAGAACCTCAAATCTCCCAAATGG
CCTATATGGGTCGTTGGCAGCGAGTCACATTACACCGTCCTGTTTGCACTCGATCCAGCT
GTCCAGGAAGAAAACGAACTTGAGCTGAGAGAGTCTCAGATAAGAAGAGCTTTTGATGCA
AGAGACCAGAGCGGAGGAGGTGGTTTCATCAGCGTGGAGGCCTTTCACCAAGTTGTTCAG
GAAACAAACATTAGACTGCCAAATGAGAAGATGAATGAGATCTGCGCCATGGGGTTCATT
GTGTGGAGCGAGTTATGGCAAGTGATCTTGGAGCTGGACAGAAACTTGGGAGGAATCAAA
GATTCATCAGGAATGATGGGAAAGAAAGTGTTTGATGTCTATCACTTCAATGGGATTGCT
AAATCAGATATAAACGGTGGTGGTCAAGCTATGGCTGTGGAAGGTGGGACGGTTCCTGTT
CAAAGGCCAAGGCTCACCAAACTAAACGTCTCTGTCCCTCCTAAATGGACACCAGAAGAG
TACATGACGTGTGCAACGTCCAGCAGCTCTGACAAAGACTCAGAAGTGAACCAGCCTAAG
CCGGCACAGCATGCACCATTGGTGGATTGTATCAGAACTCGGTGGTCACGAGCCACTTGT
AGCTGGGCTGGAGATCCTCCAAGTATAGTCTGA
    3' downstream sequence 
    agaatgttatattatggggaaaaggggaaatcgcttatttgattgggcgg..........

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