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    Transcript: Bo2g127500.1

    Description

    ThiF family protein [Source:TAIR;Acc:AT5G45900](projected from arabidopsis_thaliana,AT5G45900)

    Location

    Chromosome C2: 39,668,594-39,671,748 forward strand.

    About this transcript

    This transcript has 11 exons and is annotated with 17 domains and features.

    Gene

    This transcript is a product of gene Bo2g127500 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -Bo2g127500.12091696aa
     
    Protein coding
    		A0A0D3AUE6 Ensembl Canonical

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........caacagccattgactctcgtcgaattgcaaagagattaaaagattcggcc
    1Bo2g127500.1_exon_139,668,59439,668,73501142 
    ATGGACGAGAGAGAATCTCCACCGACGATGATACTTCAATTCGCTCCATTGAACAGCTCC
GTCGACGAAGGTTTCTGGCACAGCTTTTCCTCTTTGAAACTCGATAAGCTCGGAATCGAC
GATTCTCCGATCTCCATCACCG
     Intron 1-239,668,73639,669,091356 
    gtacgaccaatccccacaacatcga..........tttctttggattgtggaacttgcag
    2Bo2g127500.1_exon_239,669,09239,669,30910218 
    GTTTCTATGCACCGTGTTCTCATCCACAAGTCTCAAACCATCTGACTCTTCTTTCGGAGT
CATTGCCTTCTTCTTCAGATGAACAGTCACCGACCGAGAGTACTATTCTTGGGAATAGGA
ACAAGTGTCCTGTTCCAGGGACTCTCTACAACACCAACACCGTCGAAAGCTTTACTAAAC
TCGACAAACAAAGCTTGTTAAAAGCAGAAGCAAACAAG
     Intron 2-339,669,31039,669,37970 
    gtatgtatgagttttgactgttgtt..........actaaaactgtttggtgagtttcag
    3Bo2g127500.1_exon_339,669,38039,669,62601247 
    ATTTGGGAAGATATTCAATCGGGAAAGGCTCTCGAGGACTGTGCTTTGTTATCTAGATTC
CTCGTTATCTCGTTCGCTGACCTTAAGAAGTGGAGTTTCCGTTATTGGTTTGCGTTCCCT
GCACTTGTGCTTGATCCTCCTGCAAGCTTGGTTGAGTTAAAGCCAGCTTCGGAGTATTTT
ACTTCAGAAGATGCAGAATCAGTATCTGCTGCGTGTAATGAGTGGCGTGACTCAAGTTTA
ACAACTG
     Intron 3-439,669,62739,669,72498 
    gtaatcaacattctcgttctacttt..........ttacttctctgtattatgctattag
    4Bo2g127500.1_exon_439,669,72539,669,8221098 
    ATGTTCCATTCTTTTTGGTTTCGGTTTCTTCTGATGATTCAAAAGCTACCATCAGACATC
TTAAAGACTGGGAAGCCTGCCAAGGTGATCATCATAAG
     Intron 4-539,669,82339,669,89977 
    gtatgtgcgaactcatttctttcaa..........ccttgagcaacctctcttcctgcag
    5Bo2g127500.1_exon_539,669,90039,670,18302284 
    TTGCTTTTCGGTTTCTATGACCCGTGTCACCTTCCTAGTAACCCTGGCTGGCCACTTCGG
AATTATCTAGCACTTATTCGCTCAAAGTGGAACCTCGAGACTGTTTGGTTCTTCTGCTAC
AGAGAGAGCCGCGGTTTCGCTGACATGAGCCTTTCTCTTGTTGGTCAAGCCTCCATTACA
CTCTCATCTGATTCATCTGTACCTAACTCAGTGGGATGGGAGCTTAACAAAGGAAAACGA
GCTCCCAGATCCATCAGCCTTGCTAACTCCATGGATCCAACCAG
     Intron 5-639,670,18439,670,25572 
    gtacatgtttgctctctgtcaatgc..........atctgattaacgatccttttcgcag
    6Bo2g127500.1_exon_639,670,25639,670,40020145 
    GTTGGCTGTTTCTGCTTGTGATTTAAACTTGAAGTTAATGAGATGGCGTGCGTTACCGTC
TCTAGACTTAAACGTTCTGTCCTCTGTCAAATGCCTTCTTCTTGGAGCTGGTACATTGGG
TTGCCAAGTTGCTCGTACTCTTATG
     Intron 6-739,670,40139,670,47474 
    gtaatgcatcaacgagaatgctgac..........tacacctctatccttttccgtttag
    7Bo2g127500.1_exon_739,670,47539,670,82200348 
    GGTTGGGGGATCCGCAACATAACCTTTGTTGACTACGGCAAAGTAGCTATGTCTAATCCA
GTCAGACAATCTCTCTACACGTTTGAAGACTGTGTTGGTCGTGGCGAGTTCAAAGCCGTT
GCTGCTGTTAAAAGCCTTAAACAGATCTTTCCAGCAGTGGAATCTAGTGGAGTTGTTATG
GCTATACCGATGCCTGGACATCCCATCTCTAGCCAAGAAGAAGAATCTGTTCTCGGTGAT
TGCAAACGCCTTCGTGATTTGATTGAGTCTCATGATGCAGTGTTCTTGTTGACTGATACA
AGAGAAAGCAGGTGGCTACCTTCTCTTCTTTGTGCTAACGCTAATAAG
     Intron 7-839,670,82339,670,90684 
    gtaacaacatttaactctgattctt..........aactgttttgattttgaattttcag
    8Bo2g127500.1_exon_839,670,90739,671,06800162 
    ATTGCTATAAACGCGGCTTTGGGTTTCGACAGCTACATGGTAATGCGCCATGGTGCTGGC
CCCAACTCGTTGTCTGATGATATGCAGAATCTTGATATTAACAAGACAGGAAGACAGAGA
CTTGGTTGTTATTTCTGTAACGACGTTGTTGCACCTCAAGAT
     Intron 8-939,671,06939,671,15587 
    gtaatagttcttggtttagactttg..........atttttttgtttttacattttgcag
    9Bo2g127500.1_exon_939,671,15639,671,27102116 
    TCAATGACTGATCGGACACTGGACCAGCAATGCACTGTTACACGCCCAGGGCTAGCTCCT
ATTGCAGGAGCTTTAGCCGTTGAACTCTTAGTCGGAGTTCTACAACACCCACTTGG
     Intron 9-1039,671,27239,671,33766 
    gtaagtcttttgaaagtctgactca..........tcttacatgtgtttttcttttatag
    10Bo2g127500.1_exon_1039,671,33839,671,50020163 
    TATCTATGCAAAAGGAGACAACTCGAGTTCGAGTAATGGAGGAAACTCCGATGAATCACC
TCTCGGGATCTTACCTCATCAGATTAGAGGATCAGTTTCTCAGTTCTCACAGATCACACT
GCTCGGACAAGCCTCCAACAGCTGCACAGCTTGTTCTGAAACT
     Intron 10-1139,671,50139,671,58080 
    gtaagtctctacatgagatctttct..........ggatgttaaattacgcgtgtttcag
    11Bo2g127500.1_exon_1139,671,58139,671,74800168 
    GTGGTGTCAGAGTATAGAGAAAAAGGAAACAGTTTCATACTTGAAGCTATTAACCATCCT
ACATACCTGGAGGATCTTACCGGTTTAACCGAGCTTAAGAAAGCTGCTAATTCGTTTAGC
CTCGATTGGGAAGACGATGGTGATGACGATGAAGCTGTAGATATGTAA
    3' downstream sequence 
    taagtcattttcattacaggttttatgaatcataagatggctcggatatg..........

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