Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bo9g165770.1

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Location

Chromosome C9: 48,956,582-48,962,877 forward strand.

About this transcript

This transcript has 12 exons and is annotated with 18 domains and features.

Gene

This transcript is a product of gene Bo9g165770 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	Bo9g165770.1	3228	1075aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3EFH8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	476	1073	-	PTHR23068	-
Gene3D	496	547	-	1.10.8.10	-
Gene3D	548	601	-	1.10.8.10	-
Gene3D	944	1074	-	3.40.50.150	-
Pfam	949	1063	C-5 cytosine methyltransferase	PF00145	IPR001525 [Display all genes with this domain]
Pfam	195	395	Harbinger transposase-derived protein	PF04827	IPR006912 [Display all genes with this domain]
Superfamily	747	940	S-adenosyl-L-methionine-dependent methyltransferase	SSF53335	IPR029063 [Display all genes with this domain]
Superfamily	948	1064	S-adenosyl-L-methionine-dependent methyltransferase	SSF53335	IPR029063 [Display all genes with this domain]
PROSITE profiles	743	1072	SAM-dependent methyltransferase DRM	PS51680	IPR030380 [Display all genes with this domain]
Superfamily	536	601	UBA-like superfamily	SSF46934	IPR009060 [Display all genes with this domain]
PROSITE profiles	558	599	Ubiquitin-associated domain	PS50030	IPR015940 [Display all genes with this domain]

Other features

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Feature type
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End

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Feature type	Start	End
MobiDBLite	692	720
MobiDBLite	692	723
Seg	476	494
Seg	497	510
Seg	606	622
Seg	628	640
Alphafold	1	1075

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