Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bo7g104500.1

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Description

Autophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A0D3DEF2]

Location

Chromosome C7: 40,183,090-40,183,946 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene Bo7g104500 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Bo7g104500.1	366	121aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3DEF2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	1	118	-	3.10.20.90	-
CDD	12	114	-	cd16128	-
PANTHER	3	117	Autophagy protein Atg8 ubiquitin-like	PTHR10969	IPR004241 [Display all genes with this domain]
Pfam	14	117	Autophagy protein Atg8 ubiquitin-like	PF02991	IPR004241 [Display all genes with this domain]
Superfamily	3	117	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]

Other features

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Feature type
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Feature type	Start	End
Alphafold	1	121

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