Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bo6g125560.1

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Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT1G80440](projected from arabidopsis_thaliana,AT1G80440)

Location

Chromosome C6: 39,675,805-39,676,884 reverse strand.

About this transcript

This transcript has 1 exon and is annotated with 13 domains and features.

Gene

This transcript is a product of gene Bo6g125560 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Bo6g125560.1	1080	359aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3D213	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	3	47	-	cd22152	-
Pfam	4	43	F-box domain	PF00646	IPR001810 [Display all genes with this domain]
Superfamily	3	48	F-box-like domain superfamily	SSF81383	IPR036047 [Display all genes with this domain]
PANTHER	2	359	F-box/kelch-repeat protein KMD1-4	PTHR46407	IPR044595 [Display all genes with this domain]
Pfam	110	153	Kelch repeat type 1	PF01344	IPR006652 [Display all genes with this domain]
SMART	118	167	Kelch repeat type 1	SM00612	IPR006652 [Display all genes with this domain]
Pfam	167	203	Kelch repeat type 1	PF01344	IPR006652 [Display all genes with this domain]
SMART	169	216	Kelch repeat type 1	SM00612	IPR006652 [Display all genes with this domain]
Gene3D	72	355	Kelch-type beta propeller	2.120.10.80	IPR015915 [Display all genes with this domain]
Superfamily	80	349	Kelch-type beta propeller	SSF117281	IPR015915 [Display all genes with this domain]

Other features

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Feature type	Start	End
Seg	133	144
Alphafold	1	359
Alphafold	1	359

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