Brassica oleracea (BOL) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome C4: 52,802,263-52,806,917 reverse strand.
This transcript has 19 exons, is annotated with 21 domains and features and maps to 1 oligo probe.
This transcript is a product of gene Bo4g195290 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Superfamily | 814 | 870 | - | SSF57850 | - |
| CDD | 815 | 873 | - | cd16499 | - |
| Pfam | 821 | 863 | - | PF13920 | - |
| PANTHER | 3 | 875 | E3 ubiquitin ligase Bre1 | PTHR23163 | IPR013956 [Display all genes with this domain] |
| SMART | 823 | 861 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 823 | 862 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| PROSITE patterns | 838 | 847 | Zinc finger, RING-type, conserved site | PS00518 | IPR017907 [Display all genes with this domain] |
| Gene3D | 804 | 875 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 138 | 157 |
| Seg | 399 | 415 |
| Seg | 692 | 704 |
| Seg | 769 | 794 |
| Alphafold | 1 | 875 |
| Ncoils | 46 | 73 |
| Ncoils | 160 | 180 |
| Ncoils | 239 | 269 |
| Ncoils | 321 | 341 |
| Ncoils | 584 | 611 |
| Ncoils | 742 | 765 |
| Ncoils | 768 | 800 |
| Ncoils | 807 | 827 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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