Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bo2g127500.1

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Description

ThiF family protein [Source:TAIR;Acc:AT5G45900](projected from arabidopsis_thaliana,AT5G45900)

Location

Chromosome C2: 39,668,594-39,671,748 forward strand.

About this transcript

This transcript has 11 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene Bo2g127500 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Bo2g127500.1	2091	696aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3AUE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	326	694	-	3.40.50.720	-
CDD	360	670	-	cd01486	-
Pfam	343	584	THIF-type NAD/FAD binding fold	PF00899	IPR000594 [Display all genes with this domain]
PANTHER	12	675	ThiF/MoeB/HesA family	PTHR10953	IPR045886 [Display all genes with this domain]
Superfamily	353	664	Ubiquitin-activating enzyme	SSF69572	IPR035985 [Display all genes with this domain]
NCBIFAM	14	692	Ubiquitin-like modifier-activating enzyme Atg7	TIGR01381	IPR006285 [Display all genes with this domain]
TIGRFAM	14	692	Ubiquitin-like modifier-activating enzyme Atg7	TIGR01381	IPR006285 [Display all genes with this domain]
Pfam	12	326	Ubiquitin-like modifier-activating enzyme Atg7, N-terminal	PF16420	IPR032197 [Display all genes with this domain]
Gene3D	17	322	Ubiquitin-like modifier-activating enzyme Atg7, N-terminal, subdomain 1	3.40.140.70	IPR042522 [Display all genes with this domain]
Gene3D	12	296	Ubiquitin-like modifier-activating enzyme Atg7, N-terminal, subdomain 2	3.40.140.100	IPR042523 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Seg	62	79
Seg	490	500
Seg	570	582
Seg	592	604
Seg	683	695
Alphafold	1	696
Alphafold	1	696

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