Brassica oleracea (BOL)
Location
About this transcript

This transcript has 14 exons and is annotated with 64 domains and features.

Gene

This transcript is a product of gene Bo2g013280 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-Bo2g013280.12628875aa
 
Protein coding
A0A0D3AJE5 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
CDD28293-cd00200-
PROSITE profiles5691-PS50294-
PANTHER95787-PTHR19854-
PROSITE profiles98132-PS50294-
PROSITE profiles140175-PS50294-
PROSITE profiles188221-PS50294-
CDD349651-cd00200-
PROSITE profiles396434-PS50294-
PROSITE profiles441476-PS50294-
PROSITE profiles494527-PS50294-
PROSITE profiles536573-PS50294-
PROSITE profiles578615-PS50294-
PROSITE profiles620651-PS50294-
Prints161175G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints418432G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints461475G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Superfamily27638Quinoprotein alcohol dehydrogenase-like superfamilySSF50998IPR011047 [Display all genes with this domain]
Pfam674807U3 small nucleolar RNA-associated protein 13, C-terminalPF08625IPR013934 [Display all genes with this domain]
SMART4988WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam5388WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles5697WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART91130WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam93130WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles98132WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART133174WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam135174WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles140183WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART181220WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam183220WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles188229WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART346386WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART389431WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam391431WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles396440WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART434474WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam436474WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles441476WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART487526WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam493525WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles494527WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART529568WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam533567WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles536577WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART571610WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam572610WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles578619WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART613652WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam615651WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles620651WD40 repeatPS50082IPR001680 [Display all genes with this domain]
PROSITE patterns117131WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
PROSITE patterns161175WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
PROSITE patterns207221WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
Superfamily265475WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
Gene3D25179WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
Gene3D180308WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
Gene3D309530WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
Gene3D531697WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite813875
MobiDBLite817828
MobiDBLite846863
Seg338349
Seg451466
Seg847863
Alphafold1875