Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bo1g058950.1

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Description

CRM family member 3B [Source:TAIR;Acc:AT4G14510](projected from arabidopsis_thaliana,AT4G14510)

Location

Chromosome C1: 17,971,488-17,974,355 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene Bo1g058950 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	Bo1g058950.1	2352	783aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3A899	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	90	777	Intron splicing facilitator CRS1/CFM2/CFM3	PTHR31846	IPR045278 [Display all genes with this domain]
PROSITE profiles	219	315	RNA-binding, CRM domain	PS51295	IPR001890 [Display all genes with this domain]
Pfam	221	304	RNA-binding, CRM domain	PF01985	IPR001890 [Display all genes with this domain]
SMART	221	304	RNA-binding, CRM domain	SM01103	IPR001890 [Display all genes with this domain]
PROSITE profiles	420	517	RNA-binding, CRM domain	PS51295	IPR001890 [Display all genes with this domain]
SMART	422	506	RNA-binding, CRM domain	SM01103	IPR001890 [Display all genes with this domain]
Pfam	423	506	RNA-binding, CRM domain	PF01985	IPR001890 [Display all genes with this domain]
PROSITE profiles	636	736	RNA-binding, CRM domain	PS51295	IPR001890 [Display all genes with this domain]
Pfam	638	725	RNA-binding, CRM domain	PF01985	IPR001890 [Display all genes with this domain]
SMART	638	725	RNA-binding, CRM domain	SM01103	IPR001890 [Display all genes with this domain]
Superfamily	219	309	YhbY-like superfamily	SSF75471	IPR035920 [Display all genes with this domain]
Gene3D	219	320	YhbY-like superfamily	3.30.110.60	IPR035920 [Display all genes with this domain]
Superfamily	421	513	YhbY-like superfamily	SSF75471	IPR035920 [Display all genes with this domain]
Gene3D	421	517	YhbY-like superfamily	3.30.110.60	IPR035920 [Display all genes with this domain]
Superfamily	637	734	YhbY-like superfamily	SSF75471	IPR035920 [Display all genes with this domain]
Gene3D	637	738	YhbY-like superfamily	3.30.110.60	IPR035920 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	325	364
MobiDBLite	338	364
Seg	15	23
Seg	111	121
Seg	151	169
Seg	194	200
Alphafold	1	783
Ncoils	515	535
Ncoils	591	625

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