Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: BRADI_5g10820v3

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Description

Smg-4/UPF3 family protein [Source:Projected from Arabidopsis thaliana (AT1G33980) TAIR;Acc:AT1G33980]

Location

Chromosome 5: 14,279,212-14,287,000 reverse strand.

About this gene

This gene has 3 transcripts (splice variants) and 216 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	KQJ82753	3484	506aa	KQJ82753	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I1IY02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	KQJ82755	3481	505aa	KQJ82755	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I1IY03	-
-	KQJ82754	1521	506aa	KQJ82754	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0Q3GPH0	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data