Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: rpoA AVESA.00001b.r3.4Cg0000659

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Description

RNA polymerase alpha subunit [Source:NCBI gene (formerly Entrezgene);Acc:25016660]

Gene Synonyms

AvsaCp073

Location

Chromosome 4C: 48,275,819-48,284,540 forward strand.

About this gene

This gene has 10 transcripts (splice variants), 213 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
rpoA-208	AVESA.00001b.r3.4Cg0000659.8	4240	339aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3G1ATR7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
rpoA-203	AVESA.00001b.r3.4Cg0000659.3	4697	239aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3G1AUH8	-	-
rpoA-206	AVESA.00001b.r3.4Cg0000659.6	4340	239aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3G1AUH8	-	-
rpoA-205	AVESA.00001b.r3.4Cg0000659.4	4020	239aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3G1AUH8	-	-
rpoA-204	AVESA.00001b.r3.4Cg0000659.5	3396	239aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3G1AUH8	-	-
rpoA-209	AVESA.00001b.r3.4Cg0000659.9	3308	259aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
rpoA-207	AVESA.00001b.r3.4Cg0000659.7	3254	239aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3G1AUH8	-	-
rpoA-202	AVESA.00001b.r3.4Cg0000659.2	2641	150aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
rpoA-201	AVESA.00001b.r3.4Cg0000659.1	2297	150aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
rpoA-210	AVESA.00001b.r3.4Cg0000659.10	1410	299aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Splice variants

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