Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AVESA.00001b.r3.5Dg0001585

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Location

Chromosome 5D: 323,682,844-323,688,444 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 163 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	Flags
-	AVESA.00001b.r3.5Dg0001585.4	1555	392aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	AVESA.00001b.r3.5Dg0001585.1	4779	265aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AVESA.00001b.r3.5Dg0001585.2	1484	392aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AVESA.00001b.r3.5Dg0001585.3	1173	352aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data