Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: AT1G08190.1 VPS41-201

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Description

vacuolar protein sorting 41 [Source:NCBI gene (formerly Entrezgene);Acc:837340]

Location

Chromosome 1: 2,567,420-2,573,448 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 23 domains and features, is associated with 342 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene AT1G08190 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
VPS41-201	AT1G08190.1	3481	980aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P93043	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Variant table

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Variant table

This table shows known variants for this transcript. Use the 'Consequence Type' filter to view a subset of these.

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Variant ID	Chr: bp	Alleles	Class	Source	Evidence	Clin. Sig.	Conseq. Type	AA	AA coord	SIFT

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