Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT5G52660.2 AT5G52660-201

Description

Homeodomain-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:835343]

Location

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features and is associated with 277 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G52660-201	AT5G52660.2	1654	331aa	AT5G52660.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9YDF5 Q8H0W3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G52660-202	AT5G52660.1	1480	330aa	AT5G52660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,654 bps, Translation length: 331 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8H0W3

Version

AT5G52660.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.