Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT5G06600.1 UBP12-201

Description

ubiquitin-specific protease 12 [Source:NCBI gene (formerly Entrezgene);Acc:830548]

Location

About this transcript

This transcript has 32 exons, is annotated with 27 domains and features and is associated with 430 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
UBP12-201	AT5G06600.1	4094	1116aa	AT5G06600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9FPT1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
UBP12-202	AT5G06600.2	3897	1115aa	AT5G06600.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
UBP12-203	AT5G06600.3	3445	985aa	AT5G06600.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K3X1	-	-

Summary

Statistics

Exons: 32, Coding exons: 32, Transcript length: 4,094 bps, Translation length: 1,116 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9FPT1

Version

AT5G06600.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.