Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT4G39370.1 UBP27-202

Description

ubiquitin-specific protease 27 [Source:NCBI gene (formerly Entrezgene);Acc:830092]

Location

About this transcript

This transcript has 9 exons, is annotated with 14 domains and features and is associated with 333 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
UBP27-201	AT4G39370.3	1905	505aa	AT4G39370.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JVD6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
UBP27-202	AT4G39370.1	2017	494aa	AT4G39370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UYU2 Q9FPS0	-	-
UBP27-203	AT4G39370.2	1970	284aa	AT4G39370.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2H1ZEQ5	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,017 bps, Translation length: 494 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9FPS0

Version

AT4G39370.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.