Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT3G52100.1 AT3G52100-203

Description

RING/FYVE/PHD-type zinc finger family protein [Source:NCBI gene (formerly Entrezgene);Acc:824373]

Location

About this transcript

This transcript has 13 exons, is annotated with 21 domains and features and is associated with 285 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G52100-203	AT3G52100.1	2091	696aa	AT3G52100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J5R1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G52100-201	AT3G52100.2	2451	663aa	AT3G52100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LRS3	-	-
AT3G52100-202	AT3G52100.3	2369	678aa	AT3G52100.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V841 A0A384KS05	-	-
AT3G52100-204	AT3G52100.4	2309	591aa	AT3G52100.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LRS5	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,091 bps, Translation length: 696 residues

Version

AT3G52100.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.