Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT3G11910.3 UBP13-202

Description

ubiquitin-specific protease 13 [Source:NCBI gene (formerly Entrezgene);Acc:820364]

Location

About this transcript

This transcript has 33 exons, is annotated with 26 domains and features and is associated with 710 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
UBP13-203	AT3G11910.1	4251	1115aa	AT3G11910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VEE0 Q84WU2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
UBP13-201	AT3G11910.2	4193	1114aa	AT3G11910.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L9E9 F4J7I2	-	-
UBP13-204	AT3G11910.4	3988	1114aa	AT3G11910.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L9E9 F4J7I2	-	-
UBP13-202	AT3G11910.3	3973	1115aa	AT3G11910.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VEE0 Q84WU2	-	-

Summary

Statistics

Exons: 33, Coding exons: 32, Transcript length: 3,973 bps, Translation length: 1,115 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q84WU2

Version

AT3G11910.3

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.