Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT3G07610.1 IBM1-202

Description

Transcription factor jumonji (jmjC) domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:819952]

Location

About this transcript

This transcript has 16 exons, is annotated with 28 domains and features and is associated with 517 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
IBM1-203	AT3G07610.3	3266	1049aa	AT3G07610.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JFK4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
IBM1-202	AT3G07610.1	3585	1027aa	AT3G07610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9SSE9	-	-
IBM1-201	AT3G07610.2	3398	762aa	AT3G07610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JFK6	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,585 bps, Translation length: 1,027 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9SSE9

Version

AT3G07610.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.