Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT2G39090.1 APC7-201

Description

tetratricopeptide repeat (TPR)-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:818495]

Location

About this transcript

This transcript has 18 exons, is annotated with 21 domains and features and is associated with 433 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
APC7-201	AT2G39090.1	1948	558aa	AT2G39090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VSZ9 Q8VY89	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
APC7-202	AT2G39090.2	1927	514aa	AT2G39090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 1,948 bps, Translation length: 558 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VY89

Version

AT2G39090.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.