Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT2G27840.1 HDT4-202

Description

histone deacetylase-related / HD-like protein [Source:NCBI gene (formerly Entrezgene);Acc:817331]

Location

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features and is associated with 211 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
HDT4-201	AT2G27840.3	1092	203aa	AT2G27840.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9M4T3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HDT4-202	AT2G27840.1	973	144aa	AT2G27840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2H1ZE29	-	-
HDT4-203	AT2G27840.4	946	155aa	AT2G27840.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B163	-	-
HDT4-204	AT2G27840.2	792	181aa	AT2G27840.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IGT4	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 973 bps, Translation length: 144 residues

Version

AT2G27840.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.