Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT1G57800.1 VIM5-201

Description

zinc finger (C3HC4-type RING finger) family protein [Source:NCBI gene (formerly Entrezgene);Acc:842155]

Location

About this transcript

This transcript has 9 exons, is annotated with 33 domains and features and is associated with 689 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
VIM5-202	AT1G57800.2	2119	664aa	AT1G57800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AQ73	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
VIM5-201	AT1G57800.1	2107	660aa	AT1G57800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9FVS2	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,107 bps, Translation length: 660 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9FVS2

Version

AT1G57800.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.