Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
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Transcript: AT1G49040.2 SCD1-204

Description

stomatal cytokinesis defective / SCD1 protein (SCD1) [Source:NCBI gene (formerly Entrezgene);Acc:841327]

Location

About this transcript

This transcript has 23 exons, is annotated with 16 domains and features and is associated with 808 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SCD1-202	AT1G49040.1	3992	1187aa	AT1G49040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WQS8 Q8RXA7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SCD1-201	AT1G49040.4	4553	909aa	AT1G49040.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I062	-	-
SCD1-204	AT1G49040.2	3338	909aa	AT1G49040.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I062	-	-
SCD1-203	AT1G49040.3	3337	1040aa	AT1G49040.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I061	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,338 bps, Translation length: 909 residues

Version

AT1G49040.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.