Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT1G45180.1 AT1G45180-201

Description

RING/U-box superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:841086]

Location

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features and is associated with 468 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G45180-203	AT1G45180.3	2604	645aa	AT1G45180.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2DZC3 Q9MAJ1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G45180-204	AT1G45180.4	2521	645aa	AT1G45180.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2DZC3 Q9MAJ1	-	-
AT1G45180-201	AT1G45180.1	2504	645aa	AT1G45180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2DZC3 Q9MAJ1	-	-
AT1G45180-202	AT1G45180.2	2224	597aa	AT1G45180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AR79	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,504 bps, Translation length: 645 residues

Version

AT1G45180.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.