Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT1G15215.2 SHH1-203

Description

SAWADEE HOMEODOMAIN protein [Source:NCBI gene (formerly Entrezgene);Acc:838088]

Location

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features and is associated with 143 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SHH1-202	AT1G15215.4	847	264aa	AT1G15215.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W211 A0A384LAK3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SHH1-203	AT1G15215.2	1110	258aa	AT1G15215.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654EKT9 Q9XI47	-	-
SHH1-204	AT1G15215.3	1082	252aa	AT1G15215.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
SHH1-201	AT1G15215.1	544	163aa	AT1G15215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W1M1 A0A384KV25	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,110 bps, Translation length: 258 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9XI47

Version

AT1G15215.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.