Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT1G11950.1 AT1G11950-202

Description

Transcription factor jumonji (jmjC) domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:837747]

Location

About this transcript

This transcript has 13 exons, is annotated with 19 domains and features and is associated with 393 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G11950-202	AT1G11950.1	3217	875aa	AT1G11950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KZA5 C0SUU8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G11950-201	AT1G11950.2	3188	808aa	AT1G11950.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AUH1	-	-
AT1G11950-203	AT1G11950.3	3160	875aa	AT1G11950.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KZA5 C0SUU8	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 3,217 bps, Translation length: 875 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: C0SUU8

Version

AT1G11950.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.