Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT5G42220.2 AT5G42220-202

Description

Ubiquitin-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:834227]

Location

About this transcript

This transcript has 19 exons, is annotated with 36 domains and features and is associated with 631 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G42220-201	AT5G42220.1	3373	879aa	AT5G42220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654G776 Q8L745	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G42220-202	AT5G42220.2	3206	879aa	AT5G42220.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654G776 Q8L745	-	-

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 3,206 bps, Translation length: 879 residues

Version

AT5G42220.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.