Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT4G16520.1 ATG8F-201

Description

Ubiquitin-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827351]

Location

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features and is associated with 351 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ATG8F-202	AT4G16520.3	1259	121aa	AT4G16520.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B738	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ATG8F-201	AT4G16520.1	1113	121aa	AT4G16520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8VYK7	-	-
ATG8F-203	AT4G16520.2	892	121aa	AT4G16520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8VYK7	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,113 bps, Translation length: 121 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VYK7

Version

AT4G16520.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.