Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT3G47890.1 AT3G47890-201

Description

Ubiquitin carboxyl-terminal hydrolase-related protein [Source:NCBI gene (formerly Entrezgene);Acc:823944]

Location

About this transcript

This transcript has 16 exons, is annotated with 25 domains and features and is associated with 469 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G47890-201	AT3G47890.1	5250	1568aa	AT3G47890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2ER24 F4JCR1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G47890-202	AT3G47890.2	4989	1568aa	AT3G47890.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2ER24 F4JCR1	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 5,250 bps, Translation length: 1,568 residues

Version

AT3G47890.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.