Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT3G19770.1 VPS9A-201

Description

Vacuolar sorting protein 9 (VPS9) domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:821514]

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features and is associated with 152 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
VPS9A-201	AT3G19770.1	2149	520aa	AT3G19770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VEC6 Q9LT31	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
VPS9A-202	AT3G19770.2	2034	384aa	AT3G19770.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JCD2	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,149 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9LT31

Version

AT3G19770.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.