Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT3G18520.1 HDA15-201

Description

histone deacetylase 15 [Source:NCBI gene (formerly Entrezgene);Acc:821382]

Location

About this transcript

This transcript has 18 exons, is annotated with 14 domains and features and is associated with 377 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
HDA15-202	AT3G18520.2	2082	564aa	AT3G18520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J8S1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HDA15-203	AT3G18520.3	2298	451aa	AT3G18520.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNM9	-	-
HDA15-204	AT3G18520.4	2215	518aa	AT3G18520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNM8	-	-
HDA15-201	AT3G18520.1	2185	552aa	AT3G18520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GXJ1	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,185 bps, Translation length: 552 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8GXJ1

Version

AT3G18520.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.