Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT2G41500.1 LIS-201

Description

WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein [Source:NCBI gene (formerly Entrezgene);Acc:818748]

Location

About this transcript

This transcript has 7 exons, is annotated with 48 domains and features and is associated with 252 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LIS-201	AT2G41500.1	2060	554aa	AT2G41500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VMW2 O22212	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
LIS-202	AT2G41500.2	1890	554aa	AT2G41500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VMW2 O22212	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,060 bps, Translation length: 554 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O22212

Version

AT2G41500.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.