Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT2G40930.1 UBP5-202

Description

ubiquitin-specific protease 5 [Source:NCBI gene (formerly Entrezgene);Acc:818691]

Location

About this transcript

This transcript has 14 exons, is annotated with 25 domains and features and is associated with 331 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
UBP5-201	AT2G40930.2	3455	924aa	AT2G40930.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VRF5 O22207	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
UBP5-202	AT2G40930.1	3416	924aa	AT2G40930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VRF5 O22207	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 3,416 bps, Translation length: 924 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O22207

Version

AT2G40930.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.