Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT2G25170.1 PKL-201

Description

chromatin remodeling factor CHD3 (PICKLE) [Source:NCBI gene (formerly Entrezgene);Acc:817055]

Location

About this transcript

This transcript has 31 exons, is annotated with 51 domains and features and is associated with 770 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PKL-203	AT2G25170.3	4524	1410aa	AT2G25170.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AZP6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PKL-201	AT2G25170.1	4522	1384aa	AT2G25170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9S775	-	-
PKL-204	AT2G25170.4	4446	1384aa	AT2G25170.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9S775	-	-
PKL-202	AT2G25170.2	4429	1401aa	AT2G25170.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AZP2	-	-

Summary

Statistics

Exons: 31, Coding exons: 30, Transcript length: 4,522 bps, Translation length: 1,384 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9S775

Version

AT2G25170.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.