Transcript: AT5G49470.1 AT5G49470-202

Description

PAS domain-containing protein tyrosine kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:835007]

Location

About this transcript

This transcript has 12 exons, is annotated with 20 domains and features, is associated with 474 variant alleles and maps to 34 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G49470-207	AT5G49470.2	3018	831aa	AT5G49470.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K645	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G49470-203	AT5G49470.5	3361	697aa	AT5G49470.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE34	-	-
AT5G49470-202	AT5G49470.1	3152	483aa	AT5G49470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K647	-	-
AT5G49470-201	AT5G49470.3	3080	770aa	AT5G49470.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UGB9 F4K644	-	-
AT5G49470-205	AT5G49470.7	2994	643aa	AT5G49470.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE48	-	-
AT5G49470-204	AT5G49470.6	2975	700aa	AT5G49470.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE22	-	-
AT5G49470-206	AT5G49470.4	2757	744aa	AT5G49470.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K646	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,152 bps, Translation length: 483 residues

Version

AT5G49470.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.