Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT1G78915.3 AT1G78915-203

Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:844230]

Location

About this transcript

This transcript has 16 exons, is annotated with 20 domains and features and is associated with 248 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G78915-203	AT1G78915.3	1522	405aa	AT1G78915.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IBX5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G78915-201	AT1G78915.1	1460	385aa	AT1G78915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GWV1	-	-
AT1G78915-202	AT1G78915.2	1457	402aa	AT1G78915.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IBX4	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 1,522 bps, Translation length: 405 residues

Version

AT1G78915.3

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.