Transcript: AT5G53120.6 SPDS3-201

Description

spermidine synthase 3 [Source:NCBI gene (formerly Entrezgene);Acc:835392]

Location

About this transcript

This transcript has 11 exons, is annotated with 15 domains and features, is associated with 454 variant alleles and maps to 36 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SPDS3-201	AT5G53120.6	1596	386aa	AT5G53120.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KJ05	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SPDS3-202	AT5G53120.1	1521	359aa	AT5G53120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-203	AT5G53120.2	1508	359aa	AT5G53120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-205	AT5G53120.3	1461	359aa	AT5G53120.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-206	AT5G53120.4	1422	359aa	AT5G53120.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-207	AT5G53120.5	1327	359aa	AT5G53120.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-204	AT5G53120.7	1292	376aa	AT5G53120.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1R7T3F8	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,596 bps, Translation length: 386 residues

Version

AT5G53120.6

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.