Transcript: AT5G48500.1 AT5G48500-201

Description

pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein [Source:NCBI gene (formerly Entrezgene);Acc:834906]

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 314 variant alleles and maps to 40 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G48500-201	AT5G48500.1	1097	167aa	AT5G48500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UFJ5 Q8LEL0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,097 bps, Translation length: 167 residues

Version

AT5G48500.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.