Transcript: AT5G15630.1 IRX6-201

Description

COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family [Source:NCBI gene (formerly Entrezgene);Acc:831417]

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 196 variant alleles and maps to 42 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
IRX6-201	AT5G15630.1	1880	431aa	AT5G15630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9Y4Z5 Q9LFW3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
IRX6-202	AT5G15630.2	1946	382aa	AT5G15630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE86	-	-
IRX6-203	AT5G15630.3	1855	395aa	AT5G15630.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UK60 A0A384LH43	-	-
IRX6-204	AT5G15630.4	1837	382aa	AT5G15630.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE86	-	-
IRX6-205	AT5G15630.5	1208	341aa	AT5G15630.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE64	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,880 bps, Translation length: 431 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9LFW3

Version

AT5G15630.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.