Transcript: AT3G58780.1 SHP1-202

Description

K-box region and MADS-box transcription factor family protein [Source:NCBI gene (formerly Entrezgene);Acc:825047]

Location

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 260 variant alleles and maps to 37 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SHP1-201	AT3G58780.4	1467	281aa	AT3G58780.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LM26	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SHP1-203	AT3G58780.3	2148	273aa	AT3G58780.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J705	-	-
SHP1-202	AT3G58780.1	1543	248aa	AT3G58780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LNV3 P29381 Q5XXJ3	-	-
SHP1-204	AT3G58780.2	1181	241aa	AT3G58780.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1PEE1	-	-
SHP1-205	AT3G58780.5	1014	254aa	AT3G58780.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LM27	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,543 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P29381

Version

AT3G58780.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.