Transcript: AT3G16230.4 AT3G16230-204

Description

Putative eukaryotic LigT [Source:NCBI gene (formerly Entrezgene);Acc:820869]

Location

Chromosome 3: 5,500,054-5,503,573 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 382 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene AT3G16230 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G16230-201	AT3G16230.1	1911	449aa	AT3G16230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KSP6 F4J1H2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G16230-204	AT3G16230.4	2140	372aa	AT3G16230.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN58	-	-
AT3G16230-208	AT3G16230.7	2067	372aa	AT3G16230.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN58	-	-
AT3G16230-202	AT3G16230.5	2034	379aa	AT3G16230.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN59	-	-
AT3G16230-203	AT3G16230.6	2017	372aa	AT3G16230.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN58	-	-
AT3G16230-207	AT3G16230.8	1961	379aa	AT3G16230.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN59	-	-
AT3G16230-206	AT3G16230.9	1944	372aa	AT3G16230.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN58	-	-
AT3G16230-210	AT3G16230.2	1897	449aa	AT3G16230.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KSP6 F4J1H2	-	-
AT3G16230-211	AT3G16230.11	1851	379aa	AT3G16230.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN59	-	-
AT3G16230-205	AT3G16230.10	1838	449aa	AT3G16230.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KSP6 F4J1H2	-	-
AT3G16230-209	AT3G16230.3	1710	409aa	AT3G16230.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN63	-	-
AT3G16230-212	AT3G16230.12	1704	409aa	AT3G16230.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN63	-	-
AT3G16230-213	AT3G16230.13	1412	325aa	AT3G16230.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN64	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 2,140 bps, Translation length: 372 residues

Version

AT3G16230.4

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.

Transcript: AT3G16230.4 AT3G16230-204

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Transcript: AT3G16230.4 AT3G16230-204

Summary

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