Transcript: AT2G21940.2 SK1-204

Description

shikimate kinase 1 [Source:NCBI gene (formerly Entrezgene);Acc:816730]

Location

About this transcript

This transcript has 11 exons, is annotated with 14 domains and features, is associated with 332 variant alleles and maps to 30 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SK1-205	AT2G21940.4	1542	304aa	AT2G21940.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IIJ2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SK1-203	AT2G21940.3	1661	276aa	AT2G21940.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8MRG1	-	-
SK1-204	AT2G21940.2	1607	303aa	AT2G21940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9X0D4 Q9SJ05	-	-
SK1-201	AT2G21940.1	1374	303aa	AT2G21940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9X0D4 Q9SJ05	-	-
SK1-207	AT2G21940.5	1368	303aa	AT2G21940.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9X0D4 Q9SJ05	-	-
SK1-206	AT2G21940.7	974	276aa	AT2G21940.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8MRG1	-	-
SK1-202	AT2G21940.6	929	276aa	AT2G21940.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8MRG1	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,607 bps, Translation length: 303 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9SJ05

Version

AT2G21940.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.