Transcript: AT2G20180.8 PIL5-208

Description

phytochrome interacting factor 3-like 5 [Source:NCBI gene (formerly Entrezgene);Acc:816538]

Location

About this transcript

This transcript has 5 exons, is annotated with 19 domains and features, is associated with 147 variant alleles and maps to 27 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PIL5-201	AT2G20180.2	2088	478aa	AT2G20180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GZM7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PIL5-202	AT2G20180.1	2051	407aa	AT2G20180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
PIL5-203	AT2G20180.3	1913	478aa	AT2G20180.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GZM7	-	-
PIL5-207	AT2G20180.6	1903	478aa	AT2G20180.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GZM7	-	-
PIL5-206	AT2G20180.7	1866	407aa	AT2G20180.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
PIL5-205	AT2G20180.4	1799	478aa	AT2G20180.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GZM7	-	-
PIL5-204	AT2G20180.5	1762	407aa	AT2G20180.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
PIL5-208	AT2G20180.8	1391	342aa	AT2G20180.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AYE4	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,391 bps, Translation length: 342 residues

Version

AT2G20180.8

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.