Transcript: AT1G48360.2 AT1G48360-201

Description

zinc ion binding/nucleic acid binding/hydrolase [Source:NCBI gene (formerly Entrezgene);Acc:841256]

Location

About this transcript

This transcript has 15 exons, is annotated with 11 domains and features, is associated with 391 variant alleles and maps to 45 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G48360-201	AT1G48360.2	3130	891aa	AT1G48360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XVJ4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G48360-202	AT1G48360.1	3205	746aa	AT1G48360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT1G48360-203	AT1G48360.4	3179	592aa	AT1G48360.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AVS5	-	-
AT1G48360-204	AT1G48360.5	3167	509aa	AT1G48360.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AVV1	-	-
AT1G48360-205	AT1G48360.6	3126	686aa	AT1G48360.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AVS9	-	-
AT1G48360-206	AT1G48360.3	2812	513aa	AT1G48360.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,130 bps, Translation length: 891 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5XVJ4

Version

AT1G48360.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.