Arabidopsis thaliana (TAIR10)
Description

COP9-signalosome 5B [Source:NCBI gene (formerly Entrezgene);Acc:843463]

Location
About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 263 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene AT1G71230 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
CSN5B-201AT1G71230.11395358aa
 
Protein coding
A0A654EN23 Q9FVU9 -Ensembl Canonical
CSN5B-202AT1G71230.2123987aa
 
Protein coding
A0A1P8AQF0 --

This transcript corresponds to the following database identifiers:

External databaseDatabase identifier
BioGRID Interaction data, The General Repository for Interaction Datasets
EntrezGene transcript name
CSN5B-201
COP9-signalosome 5B [view all locations]
European Nucleotide Archive
INSDC protein ID
MEROPS - the Peptidase Database
Plant Structure Ontology
PO:0000037
shoot apex [view all locations]
PO:0000293
guard cell [view all locations]
PO:0001054
vascular leaf senescent stage [view all locations]
PO:0001078
plant embryo cotyledonary stage [view all locations]
PO:0001081
mature plant embryo stage [view all locations]
PO:0001185
plant embryo globular stage [view all locations]
PO:0004507
plant embryo bilateral stage [view all locations]
PO:0007098
LP.02 two leaves visible stage [view all locations]
PO:0007103
LP.10 ten leaves visible stage [view all locations]
PO:0007123
LP.06 six leaves visible stage [view all locations]
PO:0007611
petal differentiation and expansion stage [view all locations]
PO:0007616
flowering stage [view all locations]
PO:0009005
root [view all locations]
PO:0009009
plant embryo [view all locations]
PO:0009010
seed [view all locations]
PO:0009025
vascular leaf [view all locations]
PO:0009029
stamen [view all locations]
PO:0009030
carpel [view all locations]
PO:0009031
sepal [view all locations]
PO:0009032
petal [view all locations]
PO:0009046
flower [view all locations]
PO:0009047
stem [view all locations]
PO:0009052
flower pedicel [view all locations]
PO:0020030
cotyledon [view all locations]
PO:0020100
hypocotyl [view all locations]
PO:0020137
leaf apex [view all locations]
PO:0025022
collective leaf structure [view all locations]
RefSeq mRNA
NM_105792.2 [Target %id: 100; Query %id: 100] [align]
Arabidopsis thaliana COP9-signalosome 5B (CSN5B), mRNA. [view all locations]
RefSeq peptide
NP_177279.1 [Target %id: 100; Query %id: 100] [align]
COP9-signalosome 5B [view all locations]
STRING
TAIR Locus (Model)
AT1G71230.1
COP9-signalosome 5B [view all locations]
TAIR Translation identifier
AT1G71230 [view all locations]
UniParc
UniProtKB/Swiss-Prot
Q9FVU9.152 [Target %id: 100; Query %id: 100] [align]
COP9 signalosome complex subunit 5b [view all locations]
UniProtKB/TrEMBL
A0A654EN23.20 [Target %id: 100; Query %id: 100] [align]
(thale cress) hypothetical protein [view all locations]