Transcript: AT1G55250.5 HUB2-201

Description

histone mono-ubiquitination 2 [Source:NCBI gene (formerly Entrezgene);Acc:841968]

Location

About this transcript

This transcript has 19 exons, is annotated with 23 domains and features, is associated with 320 variant alleles and maps to 52 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
HUB2-203	AT1G55250.1	2779	900aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9C895	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HUB2-201	AT1G55250.5	3254	881aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8APW2 A0A654EUD4	-	-
HUB2-202	AT1G55250.3	2992	899aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I079	-	-
HUB2-204	AT1G55250.4	1793	397aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I080	-	-
HUB2-205	AT1G55250.2	1275	383aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WHT6	-	-

General identifiers

This transcript corresponds to the following database identifiers:

Filter

External database	Database identifier
EntrezGene transcript name	HUB2-201 histone mono-ubiquitination 2 [view all locations]
European Nucleotide Archive	CACRSJ010000104 [align] [view all locations] CACSHJ010000087 [align] [view all locations] CP002684 [align] [view all locations]
INSDC protein ID	ANM58688.1 [align] [view all locations] CAA0296420.1 [align] [view all locations] VYS49171.1 [align] [view all locations]
RefSeq mRNA	NM_001333696.1 [Target %id: 100; Query %id: 100] [align] Arabidopsis thaliana histone mono-ubiquitination 2 (HUB2), mRNA. [view all locations]
RefSeq peptide	NP_001321104.1 [Target %id: 100; Query %id: 100] [align] histone mono-ubiquitination 2 [view all locations]
UniParc	UPI0008496857 [view all locations]
UniProtKB/TrEMBL	A0A1P8APW2.41 [Target %id: 100; Query %id: 100] [align] E3 ubiquitin protein ligase [view all locations] A0A654EUD4.20 [Target %id: 100; Query %id: 100] [align] E3 ubiquitin protein ligase [view all locations]