Transcript: AT5G42190.1 AT5G42190-201
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Description
E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein [Source:NCBI gene (formerly Entrezgene);Acc:834224 ]
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AT5G42190-201 AT5G42190.1 1045 171aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A178UBX6 Q9FHW7 - A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical,
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Codons Alternating codons Alternating codons Exons Variants Other Markup ▼ ▲
GTTGAATTAATTTTCAGGTGTTTTCCTTTGAAAGAAAAAAACAGAGAAAATGTTTTAAAA ............................................................ ............................................................ TGAAAATTTATAGGTAAAAAAAGTCAATTGGGAATCGTTAGATCTCACTGGTTCAATGTG ............................................................ ............................................................ TGAGCCGGGCTTTAAAAACATTTTGATTTAACCCATACACACATCTCTCTGTTCCACGAT ............................................................ ............................................................ TCTCTTCCTCAGCCTCCACGTCGTCTCTAAACTCAGCAAAAACCA ATG TCG ACG GTG AGA .............................................ATGTCGACGGTGAGA .............................................-M--S--T--V--R- AAA ATC ACT CTT AAG AGT TCG GAT GGC GAA AAC TTC GAA ATT GAC GAA GCG GTG GCG CTA AAAATCACTCTTAAGAGTTCGGATGGCGAAAACTTCGAAATTGACGAAGCGGTGGCGCTA -K--I--T--L--K--S--S--D--G--E--N--F--E--I--D--E--A--V--A--L- GAG TCA CAA ACC ATC AAA CAT ATG ATT GAA GAT GAC TGT ACC GAT AAT GGT ATC CCT CTC GAGTCACAAACCATCAAACATATGATTGAAGATGACTGTACCGATAATGGTATCCCTCTC -E--S--Q--T--I--K--H--M--I--E--D--D--C--T--D--N--G--I--P--L- CCT AAT GTC ACA AGC AAG ATC CTT TCG AAG GTG ATT GAG TAC TGT AAG AGA CAT GTC GAA CCTAATGTCACAAGCAAGATCCTTTCGAAGGTGATTGAGTACTGTAAGAGACATGTCGAA -P--N--V--T--S--K--I--L--S--K--V--I--E--Y--C--K--R--H--V--E- GCT GCT GAG AAA TCC GAA ACC ACG GCC GAT GCT GCT GCT GCT ACT ACT ACC ACC ACC GTC GCTGCTGAGAAATCCGAAACCACGGCCGATGCTGCTGCTGCTACTACTACCACCACCGTC -A--A--E--K--S--E--T--T--A--D--A--A--A--A--T--T--T--T--T--V- GCG TCG GGT TCT AGT GAT GAA GAT CTC AAG ACT TGG GAT TCT GAG TTT ATC AAA GTT GAT GCGTCGGGTTCTAGTGATGAAGATCTCAAGACTTGGGATTCTGAGTTTATCAAAGTTGAT -A--S--G--S--S--D--E--D--L--K--T--W--D--S--E--F--I--K--V--D- CAG GGC ACT CTC TTC GAT CTT ATC CTG GCT GCT AAC TAC TTG AAT ATC AAG GGA CTG TTG CAGGGCACTCTCTTCGATCTTATCCTGGCTGCTAACTACTTGAATATCAAGGGACTGTTG -Q--G--T--L--F--D--L--I--L--A--A--N--Y--L--N--I--K--G--L--L- GAC TTG ACT TGC CAG ACA GTG GCT GAT ATG ATT AAA GGA AAA ACC CCA GAA GAA ATC CGT GACTTGACTTGCCAGACAGTGGCTGATATGATTAAAGGAAAAACCCCAGAAGAAATCCGT -D--L--T--C--Q--T--V--A--D--M--I--K--G--K--T--P--E--E--I--R- AAG ACG TTC AAT ATC AAG AAC GAC TTC ACG CCA GAG GAA GAA GAA GAG GTT CGC CGT GAG AAGACGTTCAATATCAAGAACGACTTCACGCCAGAGGAAGAAGAAGAGGTTCGCCGTGAG -K--T--F--N--I--K--N--D--F--T--P--E--E--E--E--E--V--R--R--E- AAT CAG TGG GCG TTT GAA TGA AGAAAAATGAAGACCTAGGTTGCTGTCATGTCCTCGACC AATCAGTGGGCGTTTGAATGA....................................... -N--Q--W--A--F--E--*-....................................... CATTTGTGTCTCCCTGTCTTATCTTCTTTCTTTGACTATATATCCATTCTCTTCTACGTG ............................................................ ............................................................ ATGGTCCAGCTAAGACAGTGGGTCGGATGTTAATGTTATGTTATGTATGTCAAATTAAAG ............................................................ ............................................................ ACTTAACTACGAAACATATTGAAGTTGTTGCTCAAAAGAGAGTGTTGGTCTTCTATTGTT ............................................................ ............................................................ TCGTCAATCATTTAGATAGGTTGTGAACACAAGTGATAAGATTTGTCTGCATGTTCTTAG ............................................................ ............................................................ AAAGAGAAAAGATCTTATTACTTGT ......................... ......................... .
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