Arabidopsis thaliana (TAIR10)
Description

Ubiquitin-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:825235]

Location
About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 125 variant alleles and maps to 38 oligo probes.

Gene

This transcript is a product of gene AT3G60640 Show transcript tableHide transcript table

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
ATG8G-201AT3G60640.11117121aa
 
Protein coding
A0A178VL35 Q9LZZ9 -Ensembl Canonical
Codons
  • Alternating codons
  • Alternating codons
Exons
  • An exon
  • Another exon
Variants
  • loading
Other
  • UTR
Markup
  • loading
                                                                          
     1 ATTCACTAATTCGATAATCTTTCGGTAAACAAAAAAGGAAAAGGTTACACGAATTGTATA     60
       ............................................................       
       ............................................................       

                                                                          
    61 TATACACATATAACTGTGACGATCGCAGTCGAAGATTAATTGAATCACACAAAGTCGAAT    120
       ............................................................       
       ............................................................       

                                                                          
   121 CCAAAGTTTTTGATCTTAACCAAGTCGCATAATCCAGAGAGGAATCAAAAGAAGATGAGT    180
       ......................................................ATGAGT      6
       ......................................................-M--S-      2

                                                                          
   181 AACGTCAGCTTCAGGCAGGATCATGATTTCGAGAAGAGGAAAGCTGAGGCTTTAAGGATC    240
     7 AACGTCAGCTTCAGGCAGGATCATGATTTCGAGAAGAGGAAAGCTGAGGCTTTAAGGATC     66
     3 -N--V--S--F--R--Q--D--H--D--F--E--K--R--K--A--E--A--L--R--I-     22

                                                                          
   241 AGAGAGAAGTATTCTGACAGAGTCCCGGTGATTGTGGAGAAGTCAGAGAAAAGTGATATC    300
    67 AGAGAGAAGTATTCTGACAGAGTCCCGGTGATTGTGGAGAAGTCAGAGAAAAGTGATATC    126
    23 -R--E--K--Y--S--D--R--V--P--V--I--V--E--K--S--E--K--S--D--I-     42

                                                                          
   301 CCAAACATTGACAAGAAGAAATACCTTGTCCCAGCTGATCTAACGGTAGGCCAGTTTGTG    360
   127 CCAAACATTGACAAGAAGAAATACCTTGTCCCAGCTGATCTAACGGTAGGCCAGTTTGTG    186
    43 -P--N--I--D--K--K--K--Y--L--V--P--A--D--L--T--V--G--Q--F--V-     62

                                                                          
   361 TATGTGATTCGTAAGAGAATCCAACTTAGTGCAGAGAAAGCTATCTTCATCTTTGTTGAT    420
   187 TATGTGATTCGTAAGAGAATCCAACTTAGTGCAGAGAAAGCTATCTTCATCTTTGTTGAT    246
    63 -Y--V--I--R--K--R--I--Q--L--S--A--E--K--A--I--F--I--F--V--D-     82

                                                                          
   421 AATGTTCTTCCTCCCACCGGAGCGATGATGTCAACCATTTACGATGAGAATAAGGAAGAA    480
   247 AATGTTCTTCCTCCCACCGGAGCGATGATGTCAACCATTTACGATGAGAATAAGGAAGAA    306
    83 -N--V--L--P--P--T--G--A--M--M--S--T--I--Y--D--E--N--K--E--E-    102

                                                                          
   481 GACGGCTTCTTGTATGTTACCTACAGTGGGGAAAACACTTTTGGATCGTCAATGACTTAA    540
   307 GACGGCTTCTTGTATGTTACCTACAGTGGGGAAAACACTTTTGGATCGTCAATGACTTAA    366
   103 -D--G--F--L--Y--V--T--Y--S--G--E--N--T--F--G--S--S--M--T--*-    121

                                                                          
   541 TTTGGTGTTCTTGCTTTTAATTGAATGTAAATATTCCATTTTCTTTTCTTGTCCGTGAAC    600
       ............................................................       
       ............................................................       

                                                                          
   601 TTGCTTAGATGCGGATATGATTATTATGGCTTATGTAGGCACAACCAATCGGTTTGCAAA    660
       ............................................................       
       ............................................................       

                                                                          
   661 CAAAGTGTTGGTTTTTTTATCCTCTGTTTTTTTCTTTGGTCTATATCTATCTTTCTCTTT    720
       ............................................................       
       ............................................................       

                                                                          
   721 CTGTGCCTTGCTCGAGCATCACACACATCATATGTTGCACCTTCACAGACCACACGAGCT    780
       ............................................................       
       ............................................................       

                                                                          
   781 ACAAGAGCCAGGTACAAAGTGTTAGTTTGGTTTTGGTTTGAGAAATTAGAGTTTTGTCCC    840
       ............................................................       
       ............................................................       

                                                                          
   841 GGCAATTCCGGGTCGAGCCCACGGAGGCTGTTGGGCTTTATCTAGACCACAATGAAGAAC    900
       ............................................................       
       ............................................................       

                                                                          
   901 GATTGTGGGCTAGGCCGACGTGGCGGTAAAAGACAAATCACATGGGGAAGCGCCACGTGT    960
       ............................................................       
       ............................................................       

                                                                          
   961 TAAAGTTAGCGGCAATGGCGGCTTGGGGTTGCGGTTAGGGCACGACCTTCACGAACAACA   1020
       ............................................................       
       ............................................................       

                                                                          
  1021 CAAAAACAGAGCGGTGATGGTCCACGCACACTTGTCTGCTGTTTCTCGACCCCACACGTT   1080
       ............................................................       
       ............................................................       

                                                                          
  1081 CTTCACTCTGCATTTTCCTTCCATAATGTATTCTCCC                          1117
       .....................................                              
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